PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024994749.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family C2H2
Protein Properties Length: 242aa    MW: 26019.2 Da    PI: 6.3025
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024994749.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.30.0002688110123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     ++C++C + F ++  L  H++ H
  XP_024994749.1  88 FSCNYCRRKFYSSQALGGHQNAH 110
                     89*****************9988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 242 aa     Download sequence    
MEPPNYVFES EEESEMSSQV ASSMSVDGGT TTSSRLTNPG HLQPTPPLPS VTLDLTLGFN  60
PMTPELATTE VAAAPTNTGS GPPVPRVFSC NYCRRKFYSS QALGGHQNAH KRERTMAKRA  120
MRMGMLSERY ASLASLPLHG STFRALSIEA HASLHQGIVP QQSPFAAMRG GARFDQSYLG  180
LPMFMEDDEA EVFWPGSFRQ IDCVGDAGGG GGSSSYHNTK HPEMPPPTGR DSGAIPDLTL  240
KL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66140.11e-45C2H2 family protein