PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_024994771.1

Organism

Cynara cardunculus var. scolymus

Taxonomic ID

59895

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus

Family

bZIP

Protein Properties

Length: 529aa MW: 58196.9 Da PI: 6.7506

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_024994771.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	33.4	9.7e-11	400	458	5	63
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 kr +r NR +A rs +RK +i eLe+kv++L++e ++L +l l+ + +l+s++ XP_024994771.1 400 KRVKRILANRQSAARSKERKMRYIVELENKVQTLQTETTSLSTQLMLLQRDSTSLTSQN 458 899*****************************************************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 529 aa Download sequence
MSETEEGIQR VQASFGPSSS SVSKLQSHVS FNHLDVPQLN TAQFRSQIRQ FAPNFINENS 60 SKRVGMPPAH PQIRSLSPPS QIPVMQSPET EGSHSRSLSQ TSFFPVDSLP QLSLSPTSAL 120 TSDQVVTDVS MEDHDLLPPS LGRENSARIS ENLPPRKTHR RSNSDIPFGF STILQSSPPL 180 IPLRGSKGLD GSASLRNNPG SKPVQYVKWE SSWEKTSGES NAKGIEERKC EGEVVDDLFS 240 AHTVFNNLDG LNSSRAENRE DLDSRASGTK AHVGDGSDNE ATSSVNGGVV NNMQRSGISS 300 IFDKREGIKR SAGGDIAPTM RHYRSVSMDS IMGKMNFADE LLKLPPSPEG CINKFPPSDS 360 INANSDTFNL EFGNGMFSGT ELKKIMANDN LAEMALTDPK RVKRILANRQ SAARSKERKM 420 RYIVELENKV QTLQTETTSL STQLMLLQRD STSLTSQNNE LKFRLQAMEQ QAQLRDALNE 480 ALTADVQRLK IMTTELSGDA AKFSQLSLNP QMFQLHQQQQ NGCATTTHE

Sequence ? help Back to Top

Protein Sequence Length: 529 aa Download sequence

MSETEEGIQR VQASFGPSSS SVSKLQSHVS FNHLDVPQLN TAQFRSQIRQ FAPNFINENS  60
SKRVGMPPAH PQIRSLSPPS QIPVMQSPET EGSHSRSLSQ TSFFPVDSLP QLSLSPTSAL  120
TSDQVVTDVS MEDHDLLPPS LGRENSARIS ENLPPRKTHR RSNSDIPFGF STILQSSPPL  180
IPLRGSKGLD GSASLRNNPG SKPVQYVKWE SSWEKTSGES NAKGIEERKC EGEVVDDLFS  240
AHTVFNNLDG LNSSRAENRE DLDSRASGTK AHVGDGSDNE ATSSVNGGVV NNMQRSGISS  300
IFDKREGIKR SAGGDIAPTM RHYRSVSMDS IMGKMNFADE LLKLPPSPEG CINKFPPSDS  360
INANSDTFNL EFGNGMFSGT ELKKIMANDN LAEMALTDPK RVKRILANRQ SAARSKERKM  420
RYIVELENKV QTLQTETTSL STQLMLLQRD STSLTSQNNE LKFRLQAMEQ QAQLRDALNE  480
ALTADVQRLK IMTTELSGDA AKFSQLSLNP QMFQLHQQQQ NGCATTTHE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38900.3	1e-129	bZIP family protein