PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024995076.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family ERF
Protein Properties Length: 224aa    MW: 23625.6 Da    PI: 4.514
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024995076.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.36.7e-1767115255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                      y+G+r  +++g+W++eIr+p++   +kr++lg++ t+e+Aa+a++ a+++l+g
  XP_024995076.1  67 TYRGIR--SRSGKWASEIREPRK---SKRIWLGTYPTPEMAAAAYDVAALSLKG 115
                     69***6..678*********843...5************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 224 aa     Download sequence    
MADPPPPPPV NVCQVDQPQH PLSLPLPPPD NPAKLQLPPR TTVMTTSSSS GGSPNRPGPA  60
TTGKHPTYRG IRSRSGKWAS EIREPRKSKR IWLGTYPTPE MAAAAYDVAA LSLKGSDAVL  120
NFPDFVGSYP VPALPEPALI RNAAAAAAGL MKSSADQRGG ALESAGGGVD TELPAENEYV  180
DVEALFDMPN LLADMAEGML MSPPRQPDDP SLGDSSDCDN LWSY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52020.19e-42ERF family protein