PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024995088.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family bZIP
Protein Properties Length: 117aa    MW: 13608.6 Da    PI: 8.9336
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024995088.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_166.83.5e-212586364
                    XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC CS
          bZIP_1  3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkseve 64
                     lkre+rkq+NRe+ArrsR+RK+ae+eeL+ +v+ L +eN  L++el++l+ e++k+ +e++
  XP_024995088.1 25 VLKREMRKQSNRESARRSRLRKQAECEELQARVAGLRNENLLLREELQRLSVECDKVANENM 86
                    58******************************************************999986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 117 aa     Download sequence    
MQPNSFAASK TVVRPPMVRK ETSRVLKREM RKQSNRESAR RSRLRKQAEC EELQARVAGL  60
RNENLLLREE LQRLSVECDK VANENMKMKD ELCKSLGPEE LLELDAFLES RFDEGNS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14046RRSRLRK
24047RRSRLRKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36730.12e-18bZIP family protein