PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024995424.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family ERF
Protein Properties Length: 345aa    MW: 38370.6 Da    PI: 6.38
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024995424.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.31.1e-19138188155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     ++++GVr+++ +g+W+AeIrdp+    r  r +lg+++taeeAa  +++a+ +l+g
  XP_024995424.1 138 KKFRGVRQRP-WGKWAAEIRDPT----RrVRLWLGTYDTAEEAAMVYDHAAIQLRG 188
                     59********.**********84....34*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 345 aa     Download sequence    
MENSATFSSS SVKFTEHKTR ITMLNKSLLP IGEKVSNRRE SSEVNAMVAG TRVVRISVTD  60
AYATDSSGDE QEVFFRRRRV KKFVNEVTIK ARSGDDCNVY CNGNRSVART AATRRKNANA  120
AVKRDVAMKK RLKVNSGKKF RGVRQRPWGK WAAEIRDPTR RVRLWLGTYD TAEEAAMVYD  180
HAAIQLRGPD ALTNFTVPPP ENLQLPEKKL SSVDSGYNSG EESQTNNKAS SPKSVLRFSP  240
SSTDECVAES TQHSPLHDAI NEPSVSENFS DFQPFNDPFS TSDLFDFPDF VPDIYDPNTM  300
FHSSDPADVF LGCGNDFAFG SSSWPADDYL QEFGDVFGSD PLVAL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G23750.12e-54ERF family protein