PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_024995436.1

Organism

Cynara cardunculus var. scolymus

Taxonomic ID

59895

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus

Family

GRF

Protein Properties

Length: 215aa MW: 23697.4 Da PI: 7.6403

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_024995436.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	77.5	1.3e-24	165	208	1	44
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 d+ep+rCrRtDGKkWRCsr+v +++k+CErH h++r rsrk +e XP_024995436.1 165 DPEPWRCRRTDGKKWRCSRDVAPDQKYCERHAHKSRPRSRKLVE 208 79***************************************987 PP
2	QLQ	55.9	1.3e-19	114	147	2	35
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqai 35 FTa+Q+q+L++Q ++yKy++a++PvPp+Ll ++ XP_024995436.1 114 LFTATQWQELERQTMIYKYIMASVPVPPQLLIPL 147 5******************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 215 aa Download sequence
MGNGDTSSGG GYDNIGGGAV ARDNDSGEAA TAFLESDVGL GMNMQSVSSY HFNKMTNFMP 60 TAPYFHHDHL HKHQASTDIN GGLVFGNQTS INNQIPSAIS LEPCSGSDTG GKVLFTATQW 120 QELERQTMIY KYIMASVPVP PQLLIPLSTQ SNKVGIDLRF SSGSDPEPWR CRRTDGKKWR 180 CSRDVAPDQK YCERHAHKSR PRSRKLVEIQ PHNTD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37740.1	3e-36	GRF family protein