PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024995472.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family ERF
Protein Properties Length: 202aa    MW: 22592.4 Da    PI: 8.4866
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024995472.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.62e-204293156
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                    + y+GVr+++ +g+Wv+eIr+p++   + r++lg+f+t+e+Aa+a++ a+ +++g+
  XP_024995472.1 42 PVYRGVRRRS-WGKWVSEIREPKK---KSRIWLGTFDTPEMAARAHDVAAIAIKGH 93
                    68*****887.**********854...6***********************99986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 202 aa     Download sequence    
TTTTTTSSSI STTTKRPKHG EFNDEVNKKA KKPDVIDHGE HPVYRGVRRR SWGKWVSEIR  60
EPKKKSRIWL GTFDTPEMAA RAHDVAAIAI KGHSAILNFP QLAHQFPKPA SNSPRDIQAA  120
ALKAATLVLR NLKDESEPNP HEPPCSSSSP QSNITDDPFL DLPDLFMDLG NRIFYALPEK  180
ITGTVTGTGE FWPEDNFLWN YS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G25810.12e-41ERF family protein