PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_024995505.1

Organism

Cynara cardunculus var. scolymus

Taxonomic ID

59895

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus

Family

bZIP

Protein Properties

Length: 158aa MW: 18297.4 Da PI: 5.6614

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_024995505.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	34.9	3.4e-11	72	123	5	56
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56 ++ rr+++NRe+ArrsR RK+ ++ eL L + N++L ++l++l + XP_024995505.1 72 RKRRRMISNRESARRSRVRKQRQLNELLSQLVRLRTDNHSLVEQLNHLAESH 123 5789**************************************9999888764 PP

Sequence ? help Back to Top
Protein Sequence Length: 158 aa Download sequence
MSPQMPQFQC MAPEENPSAF STFSIQDPIS VLHMSNLFTN IPDYFSAYPS SLSNNSTSDE 60 ADDQQMDMIN ERKRRRMISN RESARRSRVR KQRQLNELLS QLVRLRTDNH SLVEQLNHLA 120 ESHKRAVEEN AQLTEESTDI RRMLDEIQLA NASTNMLP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	72	76	RKRRR
2	85	91	RRSRVRK
3	85	92	RRSRVRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G13600.1	2e-37	bZIP family protein