PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024995516.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family ERF
Protein Properties Length: 258aa    MW: 28975.7 Da    PI: 9.8422
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024995516.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.41.8e-18103152356
             AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                     y+GVr++  rg+WvAeIr p +   r r++lg++ tae+Aa a+++a+ kl+ge
  XP_024995516.1 103 YRGVRQRQ-RGKWVAEIRLPEN---RMRVWLGTYETAEMAAYAYDRAAYKLRGE 152
                     9****999.8*********843...5**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 258 aa     Download sequence    
MQQNTMNPFL FDASTINYVQ SSLSNLILAV GNTNTFDSIF SRCLSSSSSS SSSSSQSPSS  60
VSPDQSGSSV YLKQRDLLLK FSENFDTVRQ ITREPVGFSK NLYRGVRQRQ RGKWVAEIRL  120
PENRMRVWLG TYETAEMAAY AYDRAAYKLR GEYARLNFPN LKDPTRLDGI GNGERIDALK  180
TAVDKKIQAI RLKVRREKAK KREERKRDKE VGDSPAAALY GGDLPPAAAV VAEAELDSWS  240
LARMPSYDLD LIWEVLAN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1195203RREKAKKRE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G64380.14e-36ERF family protein