PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_024995582.1

Organism

Cynara cardunculus var. scolymus

Taxonomic ID

59895

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus

Family

bZIP

Protein Properties

Length: 368aa MW: 39192.1 Da PI: 6.6142

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_024995582.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	65.7	8.2e-21	280	342	1	63
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 e+elkr+rrkq+NRe+ArrsR+RK+ae++eL++++++L++eN +L+ e+++++ +++l +e+ XP_024995582.1 280 ERELKRQRRKQSNRESARRSRLRKQAECDELAQRAETLKEENASLRAEVSRIRSDYEQLLAEN 342 89*********************************************************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 368 aa Download sequence
MGSRDMDKPA KEAKDSAKET PTSQEQSSGN AMGAVPDWTG FQAYSPMPPH GYLASSPQPH 60 PYMWGVQHLM PPYGTAPHPY VAMYPHGGIY AHPSMPPGSY PFSPFAMPSP NGVAEVSGNT 120 PGSMEVNGKS PEGKEKLPIK RSKGSLGSLN MITGKNSEPS KAGASANGSY PKSAESGSEG 180 SSEGSDANSE NNSQMKSGSR QDSMEGEASQ NGNTVHGSQN GGPNTPHSVV NPTMGIVPIS 240 AGATLGSVAG PTTNLNIVAG GMVAAGSRES MQPQLWIQDE RELKRQRRKQ SNRESARRSR 300 LRKQAECDEL AQRAETLKEE NASLRAEVSR IRSDYEQLLA ENASLKERVG ESQEEARENH 360 QTEVVQSG

Sequence ? help Back to Top

Protein Sequence Length: 368 aa Download sequence

MGSRDMDKPA KEAKDSAKET PTSQEQSSGN AMGAVPDWTG FQAYSPMPPH GYLASSPQPH  60
PYMWGVQHLM PPYGTAPHPY VAMYPHGGIY AHPSMPPGSY PFSPFAMPSP NGVAEVSGNT  120
PGSMEVNGKS PEGKEKLPIK RSKGSLGSLN MITGKNSEPS KAGASANGSY PKSAESGSEG  180
SSEGSDANSE NNSQMKSGSR QDSMEGEASQ NGNTVHGSQN GGPNTPHSVV NPTMGIVPIS  240
AGATLGSVAG PTTNLNIVAG GMVAAGSRES MQPQLWIQDE RELKRQRRKQ SNRESARRSR  300
LRKQAECDEL AQRAETLKEE NASLRAEVSR IRSDYEQLLA ENASLKERVG ESQEEARENH  360
QTEVVQSG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	297	303	RRSRLRK
2	297	304	RRSRLRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32150.1	1e-132	bZIP family protein