PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024995608.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family ERF
Protein Properties Length: 174aa    MW: 19188.1 Da    PI: 4.5571
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024995608.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.53.9e-191464155
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    s y+GVr +k +g+Wv+eIrdp++   + r++lg+f+t+e+Aa+a++a   +++g
  XP_024995608.1 14 SVYRGVRKRK-WGKWVSEIRDPVT---KSRIWLGSFDTPEMAAAAYDAVSFYFRG 64
                    78*****999.**********754...5*******************98887776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 174 aa     Download sequence    
MSDTHSSASG GTSSVYRGVR KRKWGKWVSE IRDPVTKSRI WLGSFDTPEM AAAAYDAVSF  60
YFRGDCARLN FPQMATALPR PATPSADDIR VAAHEAAMLL KPSTSEIDTG SSSGHSVPTN  120
VGLSPSEIQA INDLPLDSHE TWMEYNNDPT MYYSNPASFD HNWDEVPDDS LWDP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71450.14e-57ERF family protein