PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_024995612.1

Organism

Cynara cardunculus var. scolymus

Taxonomic ID

59895

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus

Family

G2-like

Protein Properties

Length: 271aa MW: 29478.8 Da PI: 7.6944

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_024995612.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	104.5	6.4e-33	32	86	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprlrWt +LH+rFv+av++LGG++kAtPk++l+lm++kgLtl+h+kSHLQkYRl XP_024995612.1 32 KPRLRWTADLHDRFVDAVTKLGGPDKATPKSVLRLMGLKGLTLYHLKSHLQKYRL 86 79****************************************************8 PP
2	Myb_DNA-binding	67.6	2.1e-21	34	85	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+++++++vdav++lGg+ t+k++ r mg kg+tl+++ks++qky+ XP_024995612.1 34 RLRWTADLHDRFVDAVTKLGGPdkaTPKSVLRLMGlKGLTLYHLKSHLQKYR 85 89*************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 271 aa Download sequence
MDGRYGGGGG GGGGGGCYEF ESGGVVMTRD PKPRLRWTAD LHDRFVDAVT KLGGPDKATP 60 KSVLRLMGLK GLTLYHLKSH LQKYRLGQQA KKQNNGDPNN ENSGDSYEHY NLHSTGTSSN 120 SVRANHEAGD IPIADALLCQ IEAQKRLQEQ FEVQKKLQMR IETQGKYLQG ILENAQKSLS 180 LDMNSTGNLE ATRTELTNFN LALSDLMDNL SGGERREENG KKGGSTAVKE DMKIKREGGG 240 GSISFDLNTG GNYDFIGTNP DLLALGFTRH N

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G45580.1	2e-75	G2-like family protein