PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024995755.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family C2H2
Protein Properties Length: 186aa    MW: 20538.5 Da    PI: 6.8568
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024995755.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H2140.000153456123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    y+C+ C++ F++   L  H++ H
  XP_024995755.1 34 YECTFCKRGFTNAQALGGHMNIH 56
                    99*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 186 aa     Download sequence    
MGSEKHRSSG TSSDQETGPS LSPDSSKDGV GRSYECTFCK RGFTNAQALG GHMNIHRKDK  60
AKAKQQKAFT TTVTASTKPN KDHLMVSPKS FKSIPNEEVQ YRGSSFGFRT GDHDYQLTPS  120
NPNFPCNSVA SQFDNHALHE EHLLVNLNLG IGTSEMEHSN TRSANAAQED WPENEVDLEL  180
RLGHYP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43540.12e-14C2H2 family protein