PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024995894.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family C2H2
Protein Properties Length: 247aa    MW: 27314.6 Da    PI: 7.6397
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024995894.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.50.00016688123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    y+C+ C++ F++   L  H+++H
  XP_024995894.1 66 YTCSFCKREFRSAQALGGHMNVH 88
                    9********************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 247 aa     Download sequence    
MEENGSASKS RRSSDYKNGG RAANKAIINY RKAAKDDYCW ENSTGEESFA DGGDIVGEFS  60
WPPRSYTCSF CKREFRSAQA LGGHMNVHRR EKARLRQITP PRYLPLLPPS SQYFSSNSKL  120
LDLNLDPNPN PNISTCFASN TSPFPTMFPP FTYSSMSPPP LILPSPSSVN PCSCFFPFST  180
PCPLHHQCSS DSACFTTMRS EKSNLISGGV DDVSHENKNM ILKKSETSLL VASNPDDMDL  240
ELRLGCS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23130.18e-22C2H2 family protein