PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024995915.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family ERF
Protein Properties Length: 238aa    MW: 26149.6 Da    PI: 6.3091
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024995915.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.95e-1861110255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                      y+GVr ++ +g+Wv+eIr+p++   + r++lg+f tae+Aa+a++ a+ +++g
  XP_024995915.1  61 TYRGVRMRS-WGKWVSEIREPRK---KSRIWLGTFSTAEMAARAHDVAAIAIKG 110
                     69****998.**********843...6**********************99887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 238 aa     Download sequence    
MKNAAQLDIL SSSSTVISAA TTHSKRSKRS QQDNNGNEQK KRHENRVGGD GSDGGGGHYP  60
TYRGVRMRSW GKWVSEIREP RKKSRIWLGT FSTAEMAARA HDVAAIAIKG RSAHLNFPEL  120
VHLLPQPATT SPKDIQEAAA KAAASCGGDG DRPPSQETLS DSNSSNTLSS SDNNTQESSM  180
ASPSTEEDDT FFHLPDLLLD NTNWTRDDFH YYPSSWQPMA EAVTSFRLEP DEPCSILW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44940.13e-37ERF family protein