PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024995955.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family WRKY
Protein Properties Length: 128aa    MW: 14267.6 Da    PI: 4.404
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024995955.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY55.11.5e-172412159
                    -EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY 21 prsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
                     r+YYrC+ a gC ++k+ver+++dp+v++itY+g+Hnh+
  XP_024995955.1  2 QRAYYRCSAAeGCLARKQVERKRSDPSVLIITYTGDHNHP 41
                    59*******99****************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 128 aa     Download sequence    
MQRAYYRCSA AEGCLARKQV ERKRSDPSVL IITYTGDHNH PMPPKPHFSV DGKSNNAINS  60
HDEDKNENKT TTYSSVSPTA NEAVETTMVE EKDKDADDDN VPNVVMDDDV FEGLDEIINL  120
SDGISCFK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01250.13e-18WRKY family protein