PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_024996013.1

Organism

Cynara cardunculus var. scolymus

Taxonomic ID

59895

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus

Family

Dof

Protein Properties

Length: 240aa MW: 26615.2 Da PI: 6.941

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_024996013.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	121.1	4.1e-38	35	95	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 k +al+cprC s++tkfCyynny+lsqPryfCk+CrryWt+GG+lrnvPvGg++rknk+ss XP_024996013.1 35 KPQALNCPRCTSSHTKFCYYNNYNLSQPRYFCKTCRRYWTAGGSLRNVPVGGASRKNKRSS 95 57899*****************************************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 240 aa Download sequence
MDNHANTTAR LSHKELAGGV QVKSMEEKKA IRAEKPQALN CPRCTSSHTK FCYYNNYNLS 60 QPRYFCKTCR RYWTAGGSLR NVPVGGASRK NKRSSYDDDD DHIMIMPPAS QNPSHHHIIQ 120 NHGSAYHLNS TCSSMGFFKT GSTSAGNDYE TGMMMMMNSF MPASSNVNPM VCVDGFHKKY 180 DDDDDDENNI NDHQDTTNTA AASTGARLFF PLEDLKASTS HQVQGPGDDS NSYWSGGGSW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G61850.2	9e-34	Dof family protein