PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_024996183.1

Organism

Cynara cardunculus var. scolymus

Taxonomic ID

59895

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus

Family

bZIP

Protein Properties

Length: 333aa MW: 36807.5 Da PI: 6.0854

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_024996183.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	50.7	3.8e-16	166	220	3	60
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklk 60 ++kr +r+ +NRe+ArrsR+RK+a + eLe+ v++L +e ++L k+l + +++ k XP_024996183.1 166 DVKRIKRMVSNRESARRSRKRKQAHLTELEQQVEQLRGEYSTLFKQLTNASQQ---FK 220 68******************************************665555554...44 PP

Sequence ? help Back to Top
Protein Sequence Length: 333 aa Download sequence
MEFNHSKKEE PFNDSSMCRT FSEYDIEEFL KQSDADHRNH SPAGGIFSAA DSVVFGNDDR 60 KSYGAHRCSP DLDVHYRNPN NANAFQSCGG MTGNPLWSQN HTPKNSGVTM TMDSQSSICA 120 DSPTSGTKPK RRDNHVIGAT SDDEQSDDDD TEIEAGQCEQ STDQMDVKRI KRMVSNRESA 180 RRSRKRKQAH LTELEQQVEQ LRGEYSTLFK QLTNASQQFK DASTNNRVLK SDVEALRAKV 240 KLAEDMVARG SLTSSLSHLL QNHLTTPQLF NNQNMPRMGN VSPTITVLGD DHGLSVPGQH 300 VMVGLGANPD IFNGNVKTGI NSEAGSCVTD IWP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	181	187	RRSRKRK
2	181	188	RRSRKRKQ
3	183	188	SRKRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G24800.1	2e-63	bZIP family protein