PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_024996380.1

Organism

Cynara cardunculus var. scolymus

Taxonomic ID

59895

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus

Family

bZIP

Protein Properties

Length: 413aa MW: 44028.3 Da PI: 6.8084

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_024996380.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	67.9	1.6e-21	308	370	1	63
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 e+elkr+rrkq+NRe+ArrsR+RK+ae++eL++++++L++eN++L+ e+++++ e+++l +++ XP_024996380.1 308 ERELKRQRRKQSNRESARRSRLRKQAECDELAQRAEVLKEENSSLRAEVSRIRSEYDQLLAQN 370 89*********************************************************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 413 aa Download sequence
MGSSEMDKSI KEAKDTTKEP KTTNSQEQAS GAATGTVNPD WTGFQPYPPM PPHGFLASSP 60 QAHPYMWGVQ HLMPPYGTPP HPYVAMYPHG GIYTHPSMPP GSYPFNPYAM PPNGVTEASG 120 NTPGNVEVDG KSSDGKEKLP IKRSKGSLGS LNMITGKNNE PSKAGASANG VYPKSAESGS 180 DGSSEGSDGN SENDSQMKSG SRQDSIEVTG EASQNGNSAH GSQNGGPNAP HSVVNQTMPV 240 MPVSPSGGPG SIPGPTTNLN IGMDYWSGTN SSNIPAIRGK VTSAPVAGGM VTAGSRDSMQ 300 SQLWLQDERE LKRQRRKQSN RESARRSRLR KQAECDELAQ RAEVLKEENS SLRAEVSRIR 360 SEYDQLLAQN ASLKERLGET PGREEVTSSG IEQQKGPKGH QDGQTEQLVQ SRE

Sequence ? help Back to Top

Protein Sequence Length: 413 aa Download sequence

MGSSEMDKSI KEAKDTTKEP KTTNSQEQAS GAATGTVNPD WTGFQPYPPM PPHGFLASSP  60
QAHPYMWGVQ HLMPPYGTPP HPYVAMYPHG GIYTHPSMPP GSYPFNPYAM PPNGVTEASG  120
NTPGNVEVDG KSSDGKEKLP IKRSKGSLGS LNMITGKNNE PSKAGASANG VYPKSAESGS  180
DGSSEGSDGN SENDSQMKSG SRQDSIEVTG EASQNGNSAH GSQNGGPNAP HSVVNQTMPV  240
MPVSPSGGPG SIPGPTTNLN IGMDYWSGTN SSNIPAIRGK VTSAPVAGGM VTAGSRDSMQ  300
SQLWLQDERE LKRQRRKQSN RESARRSRLR KQAECDELAQ RAEVLKEENS SLRAEVSRIR  360
SEYDQLLAQN ASLKERLGET PGREEVTSSG IEQQKGPKGH QDGQTEQLVQ SRE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	325	331	RRSRLRK
2	325	332	RRSRLRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G35530.1	1e-143	bZIP family protein