PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_024996381.1

Organism

Cynara cardunculus var. scolymus

Taxonomic ID

59895

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus

Family

bZIP

Protein Properties

Length: 412aa MW: 43956.2 Da PI: 6.8084

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_024996381.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	67.9	1.6e-21	307	369	1	63
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 e+elkr+rrkq+NRe+ArrsR+RK+ae++eL++++++L++eN++L+ e+++++ e+++l +++ XP_024996381.1 307 ERELKRQRRKQSNRESARRSRLRKQAECDELAQRAEVLKEENSSLRAEVSRIRSEYDQLLAQN 369 89*********************************************************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 412 aa Download sequence
MGSSEMDKSI KEAKDTTKEP KTTNSQEQAS GAATGTVNPD WTGFQPYPPM PPHGFLASSP 60 QAHPYMWGVQ HLMPPYGTPP HPYVAMYPHG GIYTHPSMPP GSYPFNPYAM PPNGVTEASG 120 NTPGNVEVDG KSSDGKEKLP IKRSKGSLGS LNMITGKNNE PSKAGASANG VYPKSAESGS 180 DGSSEGSDGN SENDSQMKSG SRQDSIEGEA SQNGNSAHGS QNGGPNAPHS VVNQTMPVMP 240 VSPSGGPGSI PGPTTNLNIG MDYWSGTNSS NIPAIRGKVT SAPVAGGMVT AGSRDSMQSQ 300 LWLQQDEREL KRQRRKQSNR ESARRSRLRK QAECDELAQR AEVLKEENSS LRAEVSRIRS 360 EYDQLLAQNA SLKERLGETP GREEVTSSGI EQQKGPKGHQ DGQTEQLVQS RE

Sequence ? help Back to Top

Protein Sequence Length: 412 aa Download sequence

MGSSEMDKSI KEAKDTTKEP KTTNSQEQAS GAATGTVNPD WTGFQPYPPM PPHGFLASSP  60
QAHPYMWGVQ HLMPPYGTPP HPYVAMYPHG GIYTHPSMPP GSYPFNPYAM PPNGVTEASG  120
NTPGNVEVDG KSSDGKEKLP IKRSKGSLGS LNMITGKNNE PSKAGASANG VYPKSAESGS  180
DGSSEGSDGN SENDSQMKSG SRQDSIEGEA SQNGNSAHGS QNGGPNAPHS VVNQTMPVMP  240
VSPSGGPGSI PGPTTNLNIG MDYWSGTNSS NIPAIRGKVT SAPVAGGMVT AGSRDSMQSQ  300
LWLQQDEREL KRQRRKQSNR ESARRSRLRK QAECDELAQR AEVLKEENSS LRAEVSRIRS  360
EYDQLLAQNA SLKERLGETP GREEVTSSGI EQQKGPKGHQ DGQTEQLVQS RE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	324	330	RRSRLRK
2	324	331	RRSRLRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G35530.1	1e-142	bZIP family protein