PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_024996384.1

Organism

Cynara cardunculus var. scolymus

Taxonomic ID

59895

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus

Family

bZIP

Protein Properties

Length: 409aa MW: 43570.8 Da PI: 7.0361

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_024996384.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	67.9	1.6e-21	304	366	1	63
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 e+elkr+rrkq+NRe+ArrsR+RK+ae++eL++++++L++eN++L+ e+++++ e+++l +++ XP_024996384.1 304 ERELKRQRRKQSNRESARRSRLRKQAECDELAQRAEVLKEENSSLRAEVSRIRSEYDQLLAQN 366 89*********************************************************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 409 aa Download sequence
MGSSEMDKSI KEAKDTTKEP KTTNSQASGA ATGTVNPDWT GFQPYPPMPP HGFLASSPQA 60 HPYMWGVQHL MPPYGTPPHP YVAMYPHGGI YTHPSMPPGS YPFNPYAMPP NGVTEASGNT 120 PGNVEVDGKS SDGKEKLPIK RSKGSLGSLN MITGKNNEPS KAGASANGVY PKSAESGSDG 180 SSEGSDGNSE NDSQMKSGSR QDSIEGEASQ NGNSAHGSQN GGPNAPHSVV NQTMPVMPVS 240 PSGGPGSIPG PTTNLNIGMD YWSGTNSSNI PAIRGKVTSA PVAGGMVTAG SRDSMQSQLW 300 LQDERELKRQ RRKQSNRESA RRSRLRKQAE CDELAQRAEV LKEENSSLRA EVSRIRSEYD 360 QLLAQNASLK ERLGETPGRE EVTSSGIEQQ KGPKGHQDGQ TEQLVQSRE

Sequence ? help Back to Top

Protein Sequence Length: 409 aa Download sequence

MGSSEMDKSI KEAKDTTKEP KTTNSQASGA ATGTVNPDWT GFQPYPPMPP HGFLASSPQA  60
HPYMWGVQHL MPPYGTPPHP YVAMYPHGGI YTHPSMPPGS YPFNPYAMPP NGVTEASGNT  120
PGNVEVDGKS SDGKEKLPIK RSKGSLGSLN MITGKNNEPS KAGASANGVY PKSAESGSDG  180
SSEGSDGNSE NDSQMKSGSR QDSIEGEASQ NGNSAHGSQN GGPNAPHSVV NQTMPVMPVS  240
PSGGPGSIPG PTTNLNIGMD YWSGTNSSNI PAIRGKVTSA PVAGGMVTAG SRDSMQSQLW  300
LQDERELKRQ RRKQSNRESA RRSRLRKQAE CDELAQRAEV LKEENSSLRA EVSRIRSEYD  360
QLLAQNASLK ERLGETPGRE EVTSSGIEQQ KGPKGHQDGQ TEQLVQSRE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	321	327	RRSRLRK
2	321	328	RRSRLRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G35530.1	1e-142	bZIP family protein