PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_024996385.1

Organism

Cynara cardunculus var. scolymus

Taxonomic ID

59895

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus

Family

bZIP

Protein Properties

Length: 388aa MW: 41494.5 Da PI: 6.6148

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_024996385.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	68	1.5e-21	283	345	1	63
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 e+elkr+rrkq+NRe+ArrsR+RK+ae++eL++++++L++eN++L+ e+++++ e+++l +++ XP_024996385.1 283 ERELKRQRRKQSNRESARRSRLRKQAECDELAQRAEVLKEENSSLRAEVSRIRSEYDQLLAQN 345 89*********************************************************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 388 aa Download sequence
MGSSEMDKSI KEAKDTTKEP KTTNSQEQAS GAATGTVNPD WTGFQPYPPM PPHGFLASSP 60 QAHPYMWGVQ HLMPPYGTPP HPYVAMYPHG GIYTHPSMPP GSYPFNPYAM PPNGVTEASG 120 NTPGNVEVDG KSSDGKEKLP IKRSKGSLGS LNMITGKNNE PSKAGASANG VYPKSAESGS 180 DGSSEGSDGN SENDSQMKSG SRQDSIEVTG EASQNGNSAH GSQNGGPNAP HSVVNQTMPV 240 MPVSPSGGPG SIPGPTTNLN IGGMVTAGSR DSMQSQLWLQ QDERELKRQR RKQSNRESAR 300 RSRLRKQAEC DELAQRAEVL KEENSSLRAE VSRIRSEYDQ LLAQNASLKE RLGETPGREE 360 VTSSGIEQQK GPKGHQDGQT EQLVQSRE

Sequence ? help Back to Top

Protein Sequence Length: 388 aa Download sequence

MGSSEMDKSI KEAKDTTKEP KTTNSQEQAS GAATGTVNPD WTGFQPYPPM PPHGFLASSP  60
QAHPYMWGVQ HLMPPYGTPP HPYVAMYPHG GIYTHPSMPP GSYPFNPYAM PPNGVTEASG  120
NTPGNVEVDG KSSDGKEKLP IKRSKGSLGS LNMITGKNNE PSKAGASANG VYPKSAESGS  180
DGSSEGSDGN SENDSQMKSG SRQDSIEVTG EASQNGNSAH GSQNGGPNAP HSVVNQTMPV  240
MPVSPSGGPG SIPGPTTNLN IGGMVTAGSR DSMQSQLWLQ QDERELKRQR RKQSNRESAR  300
RSRLRKQAEC DELAQRAEVL KEENSSLRAE VSRIRSEYDQ LLAQNASLKE RLGETPGREE  360
VTSSGIEQQK GPKGHQDGQT EQLVQSRE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	300	306	RRSRLRK
2	300	307	RRSRLRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32150.1	1e-130	bZIP family protein