PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024996503.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family WRKY
Protein Properties Length: 240aa    MW: 27730.4 Da    PI: 6.7188
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024996503.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY94.38.6e-30120179159
                     ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     ++Dgy+WrKYGqK+ ++++ pr+YY+C++a +Cpvkkkv+rs ++ ++++++YegeHnhe
  XP_024996503.1 120 VKDGYQWRKYGQKVTRDNPSPRAYYKCSFApSCPVKKKVQRSVDNDHLLVVIYEGEHNHE 179
                     58***************************99****************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 240 aa     Download sequence    
MVLDTSRAID LNVTPFHKTD DTPMNVDLNQ MSLENKKLKE MLTIVWDKNT TLQNHVNKLM  60
QDNEVLLNNP HKRKFGQCAE GCASGSTENL HDHGSLKRPN EGITRVYRRI DDLSDKSMVV  120
KDGYQWRKYG QKVTRDNPSP RAYYKCSFAP SCPVKKKVQR SVDNDHLLVV IYEGEHNHES  180
MEKEPEIQTS SISRLNSPME MLKYDQVLVE QMANSLRRKP DFIEDLADAI SSNILEYELF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80840.12e-49WRKY family protein