PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024996542.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family WRKY
Protein Properties Length: 310aa    MW: 35341.4 Da    PI: 5.0286
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024996542.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY92.33.7e-29110169258
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnh 58 
                     +Dgy+WrKYGqK++ g+++pr+YYrCt++   gC ++k+v+rs+ed +v+e+tY+g+H++
  XP_024996542.1 110 SDGYSWRKYGQKDILGANHPRAYYRCTHRnfqGCLATKQVQRSDEDSSVFEVTYKGRHTC 169
                     7***************************98989*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 310 aa     Download sequence    
METGHKRPLI NELTQGKELA YQLKNHLDKT MSAQNCDFLV EKILSSYEKA LSMLNWGTAF  60
DEISPRTEVS DPADSPHRCN KNVFKKRKTM AKWSEQVKVC SGTMVEAPLS DGYSWRKYGQ  120
KDILGANHPR AYYRCTHRNF QGCLATKQVQ RSDEDSSVFE VTYKGRHTCI QANQLSKALE  180
KKPKKEEVEE EGMIQDSKPT QKMQYDDGFS FKVNKGMNTS EEGAFPSFSF PSTPIETEKL  240
ENLIYLGCDS TTFITLDHNL QSSDSDLSEM INSTQNSGEN SPLVDWDLSL DYVDFDSNFH  300
FDITDSEMFS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11070.17e-43WRKY family protein