PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024996651.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family NF-YC
Protein Properties Length: 120aa    MW: 13271.4 Da    PI: 9.6101
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024996651.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC105.92.5e-33231021997
           NF-YC  19 helPlarikkilka.dedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivp 97 
                     h lPlarikki+k+   dvkmis eaP ++skacelfi elt rsw+ + + krrt++k d+a+av  td+fdfl+d v 
  XP_024996651.1  23 HLLPLARIKKIMKKsSVDVKMISGEAPLVFSKACELFIEELTKRSWNMTIQGKRRTVHKEDVASAVVTTDVFDFLIDLVH 102
                     789*********86167************************************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 120 aa     Download sequence    
MRQAGAYSGI LSGGGISGRT GPHLLPLARI KKIMKKSSVD VKMISGEAPL VFSKACELFI  60
EELTKRSWNM TIQGKRRTVH KEDVASAVVT TDVFDFLIDL VHPNASDHPS LNEEYMDKKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G54830.34e-33NF-YC family protein