PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024996674.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family ERF
Protein Properties Length: 284aa    MW: 31769.7 Da    PI: 9.6069
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024996674.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.47.3e-18102152256
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                      y+GVr+++ +g+WvAeIr p +   r r++lg++ tae+Aa a+++a+ k++ge
  XP_024996674.1 102 LYRGVRQRH-WGKWVAEIRLPHN---RMRVWLGTYETAEMAAFAYDRAAYKIRGE 152
                     59******9.**********733...4**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 284 aa     Download sequence    
MNECNPNSFD RNTNNDRFRS SFPNFIFTGM NSNNLDSIFS NRSSSSSLAI PDLQEQSGSS  60
VYLKQIDRFF KLSGNLDSKS QITTNPVGFR HYLINPNKKK KLYRGVRQRH WGKWVAEIRL  120
PHNRMRVWLG TYETAEMAAF AYDRAAYKIR GEHARLNFQD SAAVVGLIGD WRRLNALKTA  180
VDDKIHAIYQ KVMKEKGKKR EVRERVPAAV YGGGGGENFG GSNTGWLEDG FLKGENSTSS  240
FPDNLPLIAA TTTTVAAEDV VLDGCSLAGM PSYDPDLIWE VLAG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G22190.11e-33ERF family protein