PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024996676.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family ERF
Protein Properties Length: 228aa    MW: 25137.3 Da    PI: 7.5597
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024996676.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.57.8e-19127177255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+++AeIrdp +ng  +r++lg+f tae+Aa a++ a+ +++g
  XP_024996676.1 127 HYRGVRRRP-WGKFAAEIRDPAKNG--ARVWLGTFETAEDAAFAYDTAAYRMRG 177
                     8********.***********9987..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 228 aa     Download sequence    
MMGNNGFDSD FALLESIRRH LLDDSAINSG IGAPPMHCRS TTTLFPCLSE TWGELPLKEN  60
DSEDMLIARF LHEALDFECL PAPSNSIASV KSEPEILVGS PGVSSYQGES PLQKTAVQGV  120
VEQKGKHYRG VRRRPWGKFA AEIRDPAKNG ARVWLGTFET AEDAAFAYDT AAYRMRGSRA  180
LLNFPLRINS GEPEPVRITS KRRATSPASS SEDRSSKRGK RVETETHL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17500.12e-58ERF family protein