PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024996793.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family B3
Protein Properties Length: 138aa    MW: 15636.9 Da    PI: 8.2263
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024996793.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B335.32.1e-1122104489
                     E-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS..SE CS
              B3   4 vltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr..se 89 
                     v ++++  k+ +l +p k  e+       + ++t++    +g++W++ +  ++  +r+   + W +F+ +n+L +gD +vF+l++   s+
  XP_024996793.1  22 VISRAHLAKRFQLLIPHKLSEKLpaA---RVPTTII---CHGKTWDLDYMGDQVTKRF-QNQSWGGFATDNKLGTGDACVFELMEGgsSS 104
                     56677888999999999999888532...3445666...69********766666665.567********************88441233 PP
Sequence ? help Back to Top
Protein Sequence    Length: 138 aa     Download sequence    
MLEPQGDAEF WPLSGKPFFY VVISRAHLAK RFQLLIPHKL SEKLPAARVP TTIICHGKTW  60
DLDYMGDQVT KRFQNQSWGG FATDNKLGTG DACVFELMEG GSSSSRIKFR VQILRNKFPA  120
ELMENAEGYN MNNPINID