PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_024996920.1

Organism

Cynara cardunculus var. scolymus

Taxonomic ID

59895

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus

Family

Dof

Protein Properties

Length: 325aa MW: 35255.1 Da PI: 8.9383

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_024996920.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	125.4	1.8e-39	53	112	4	63
zf-Dof 4 kalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkksss 63 ++++cprCdstntkfCyynnyslsqPryfCk+CrryWt+GG+lrn+PvGgg+rknk+sss XP_024996920.1 53 AHVNCPRCDSTNTKFCYYNNYSLSQPRYFCKTCRRYWTEGGTLRNIPVGGGSRKNKRSSS 112 6789****************************************************9875 PP

Sequence ? help Back to Top
Protein Sequence Length: 325 aa Download sequence
MDRPQWPQEI VVKPMEEIVV PNTTNSSNSN PSKPSSSSSS FERRVIRPQK AAAHVNCPRC 60 DSTNTKFCYY NNYSLSQPRY FCKTCRRYWT EGGTLRNIPV GGGSRKNKRS SSSSSTGLSH 120 PSVSISKKLP DLFVPPASTS VLSQNPRIHH GHYGQDLNLG FPSTNNFKNV SEFLQVPNFD 180 HGTRNMTSSS ASTTSSTTTT ASAQLSAMEL LTGITTRGTT INSFMPIPIP DPNSVYSPSG 240 QLMIPMPEFK IPSLGFSLDG MASGGRGYGN SLHESTTAGG TLLFPFEELK TNTQTTHEDP 300 DHVGQTRDQN GDSNGFWNGM LGGGS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G24060.1	1e-37	Dof family protein