PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024996957.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family B3
Protein Properties Length: 246aa    MW: 28883.9 Da    PI: 10.4915
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024996957.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B350.92.7e-161296190
                    EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS
              B3  1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90
                    ffk+l++ dv     l lp +fa+++ +kk++++tl+l+++s  +W+v +      +ry++  GW +F ++n+Lk g f+vF l + s f
  XP_024996957.1 12 FFKILLRDDVDY---LPLPSSFAKRYLKKKKKNVTLVLKTKSTIKWKVMY--LEIEDRYYFIHGWLNFINDNHLKMGHFLVFWLLSPSIF 96
                    778887777775...57*********888899******************..999999************************87665655 PP
2B347.82.6e-151572381499
                     T-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE..EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
              B3  14 grlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr..yvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                     + + + k+f+++ g++  + + l+l++ +g++Wevk+  ++++++   ++++GW +F k+n++++gD + F++++     l+v++f+k
  XP_024996957.1 157 HKMLMTKSFLQDVGMN--GCRRLRLKNVDGKVWEVKV--KRYGRKvaPYMSTGWIKFRKENKIEVGDLCEFSHVK--ANLLRVHIFKK 238
                     4466678888777877..6789***************..5555555599999********************765..55579999986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 246 aa     Download sequence    
MDLMNNGNGV SFFKILLRDD VDYLPLPSSF AKRYLKKKKK NVTLVLKTKS TIKWKVMYLE  60
IEDRYYFIHG WLNFINDNHL KMGHFLVFWL LSPSIFQVWI YAPNGCLTNP TTTCSGGSKN  120
ENILKKPFIK EEEASDDDSM ESDKKSLKRV ITKNYIHKML MTKSFLQDVG MNGCRRLRLK  180
NVDGKVWEVK VKRYGRKVAP YMSTGWIKFR KENKIEVGDL CEFSHVKANL LRVHIFKKGK  240
QVNKNR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31690.12e-09B3 family protein