PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024996969.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family ERF
Protein Properties Length: 185aa    MW: 21207.4 Da    PI: 7.8045
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024996969.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.61.8e-19109159255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+++AeIrdp+ +g   r++lg+f+ta eAa+a+++ +  ++g
  XP_024996969.1 109 KYRGVRQRP-WGKYAAEIRDPKRRG--SRVWLGTFDTAIEAAEAYDRTAFMMRG 159
                     8********.**********96554..**********************99998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 185 aa     Download sequence    
MATPDEAAAL EFIRQHLLDE FESSPIHQIF THHCTTSSSI SSSHSDSSDF TNHSTTYDQT  60
PNTGHFSENE VIKPEILDFV SSNPIEIRSR KARQEFDERS ATRREAERKY RGVRQRPWGK  120
YAAEIRDPKR RGSRVWLGTF DTAIEAAEAY DRTAFMMRGS KAILNFPLEV AKLQKTDDGG  180
QKRNR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47230.14e-37ERF family protein