PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_024997023.1

Organism

Cynara cardunculus var. scolymus

Taxonomic ID

59895

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus

Family

bZIP

Protein Properties

Length: 403aa MW: 42809.4 Da PI: 6.6854

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_024997023.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	68.8	8.9e-22	262	324	1	63
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 ++elkrerrkq+NRe+ArrsR+RK+ae eeL+ kv++L +eN +L++e+++l+++++klk e+ XP_024997023.1 262 DRELKRERRKQSNRESARRSRLRKQAEAEELAVKVEALNNENLTLRSEINKLTDNSEKLKLEN 324 689*********************************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 403 aa Download sequence
MGIHEEEKPC KPEKSSSPPT EQEQQQQQTN VHVYPDWMAM QAYYGPRMAV PPYFNSALAA 60 GHGPPPYMWG PPQHMMPPYA AFYPHGGVYA HPGVHLATSP LNVDSPAKSS GDSDRGLMKK 120 LKGFDGLAMS IGNGNGDGAE GGNDNGISHS GETEGSSEGS DGNTTEGGQV GRKRSHEGSP 180 ILPAVGKSET HSGELLSTGA DGTSSKTSGV AVASAKVSGK AGGVLSANPI TELNLKNSPT 240 AAANMTSSFV PLIPNENLLQ NDRELKRERR KQSNRESARR SRLRKQAEAE ELAVKVEALN 300 NENLTLRSEI NKLTDNSEKL KLENAKLMEK LKNTERGVME DPRCNKGSGS SLSTANLLSR 360 VDNSSGCVVR NEGESEVNKD PDSGAKLRQL LDSSPRADAV AAG

Sequence ? help Back to Top

Protein Sequence Length: 403 aa Download sequence

MGIHEEEKPC KPEKSSSPPT EQEQQQQQTN VHVYPDWMAM QAYYGPRMAV PPYFNSALAA  60
GHGPPPYMWG PPQHMMPPYA AFYPHGGVYA HPGVHLATSP LNVDSPAKSS GDSDRGLMKK  120
LKGFDGLAMS IGNGNGDGAE GGNDNGISHS GETEGSSEGS DGNTTEGGQV GRKRSHEGSP  180
ILPAVGKSET HSGELLSTGA DGTSSKTSGV AVASAKVSGK AGGVLSANPI TELNLKNSPT  240
AAANMTSSFV PLIPNENLLQ NDRELKRERR KQSNRESARR SRLRKQAEAE ELAVKVEALN  300
NENLTLRSEI NKLTDNSEKL KLENAKLMEK LKNTERGVME DPRCNKGSGS SLSTANLLSR  360
VDNSSGCVVR NEGESEVNKD PDSGAKLRQL LDSSPRADAV AAG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	279	285	RRSRLRK
2	279	286	RRSRLRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46270.2	2e-45	bZIP family protein