PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026377352.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family RAV
Protein Properties Length: 372aa    MW: 42833.2 Da    PI: 7.4535
Description RAV family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026377352.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2361.7e-115399254
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkle 54
                    ++kGV   + +grW A+I+       + +r+++g+f ++ +Aaka++ a+ kl+
  XP_026377352.1 53 RFKGVVLQP-NGRWGAQIYS------NhQRIWIGTFNSESDAAKAYDSAAVKLR 99
                    69*******.8******999......44**********88**********9998 PP
2B387.21.4e-27177273185
                     EEEE-..-HHHHTT-EE--HHH.HTT.............---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.............ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvF 82 
                     f+k+ltpsdv+k++rlv+pkk+a ++             gg+   +++l + d++ + W+++++y+k+s++yv+t+GW++Fvk+++Lk +D+v+F
  XP_026377352.1 177 FQKELTPSDVGKLNRLVIPKKYAVKYfpkvseapleeedGGV-IDDIQLPFVDRDMKLWKFRYCYWKSSQSYVFTRGWNRFVKDKKLKKNDVVTF 270
                     99************************9988888776665333.3778999999999*************************************** PP

                     EE- CS
              B3  83 kld 85 
                     ++ 
  XP_026377352.1 271 YRC 273
                     *43 PP
Sequence ? help Back to Top
Protein Sequence    Length: 372 aa     Download sequence    
MEEEMMLNMV PYTALSAAVG GEGSDSNRSN SNSPCGLSKK RHRQQDGIKP SARFKGVVLQ  60
PNGRWGAQIY SNHQRIWIGT FNSESDAAKA YDSAAVKLRS GDSHRNIPLT TQTSLEPDFQ  120
KPYSIDEVLV MLKDGSYETK LHEFMNSSEK QDRESGFGVN LFRGNVNDGS VKCQQLFQKE  180
LTPSDVGKLN RLVIPKKYAV KYFPKVSEAP LEEEDGGVID DIQLPFVDRD MKLWKFRYCY  240
WKSSQSYVFT RGWNRFVKDK KLKKNDVVTF YRCECREWFQ NKPFYLIHVA SNGDEDNRLD  300
LQLGFSWNTN ETGPSDRTIK LWQNKEEVIM EVTPPQQQPD EEKRPLIMEV APPQQQPDEE  360
KKAFRLFGVN IN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50680.17e-82RAV family protein