PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026377366.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

CAMTA

Protein Properties

Length: 1021aa MW: 114180 Da PI: 5.2516

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026377366.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	170.6	2.4e-53	15	131	2	117
CG-1 2 lke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfq 95 ++e k+rwlk+ e++ iL+n+e+ +lt++++++p+sgsl+L+n++++r+fr+DGy w+kkkdg+tv E+he+LKvg++e+l+cyYah+e+np fq XP_026377366.1 15 VQEaKRRWLKPVEVLFILQNHENRQLTESAPQKPPSGSLFLFNKRVLRFFRRDGYGWRKKKDGRTVGEAHERLKVGNTEALNCYYAHGEQNPCFQ 109 667699*************************************************************************************** PP CG-1 96 rrcywlLeeelekivlvhylev 117 rr+yw+L+ ++e+ivlvhy+ev XP_026377366.1 110 RRSYWMLDPAYEHIVLVHYREV 131 ******************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 1021 aa Download sequence
MMQTPSLGFN INELVQEAKR RWLKPVEVLF ILQNHENRQL TESAPQKPPS GSLFLFNKRV 60 LRFFRRDGYG WRKKKDGRTV GEAHERLKVG NTEALNCYYA HGEQNPCFQR RSYWMLDPAY 120 EHIVLVHYRE VSEGRYSAAS SSHLSPGSST IIQEHTLYTS IPGSGSAVTE SHEPYQSSFS 180 PLSMEVSSVL AVQNNGVDHL DGDDEFTEVS RSSNAEVGQA LRRLEEQLSL NDNDIEEIPP 240 YHRQNGQSED LGGSYSETRP YHDNLEDSEI VNNHQYYGEG SGMLDDSEDS LFIQASDENG 300 KQLHKKNLPG NRIERKDSPF WKEMLELCSG SALIESRDRS LSSLDGSEKL VSTEMENISS 360 FPAPTSQWID LTGDDTENGI NCLPSSEDSI QISAARQFLL GSDDPVSPAS VSVAQEVENS 420 EVSTGLTGLN IYKPNPDSYN MWNDQGGQPR NIYSAESSCN TAQQKKFIIR EISPGWGYAT 480 EDTKVFIIGL FLSDPSESAW HCMFGDIETP ARIIQEGVLC CHAPPNISGK VPLYVTSGNR 540 ECCSEIREFE YIVRPRDSTR STEELLLLVR FAQMLLFDPV AVKEDTVAWG IDAAKKTKVD 600 EDHWEYMIEA LLLDSETSLG TIDWLLQKIL KDKLEKWLAS KHQEGDTPNC SLSKREQGVI 660 HMAGALGFEW ALSPILQSGI NINFRDVNGW TALHWAARFG REKMIAALIA AGASAEAVTD 720 PTSHDLVGKT AGSIAAASGH KGLAGYLSEV ALTSHLSSLT IEESELSKGS AVAEAERTVE 780 SISGGRLGET EDQVYLKDYL SAVRNAAQAA ARIQSAFRAH SFKRRQQKEV ASASDDEYGL 840 TPEYVAGLSA ASKIAFRGRD HNFDKAALSI QKKYRGWKGR KDFLALRQKV VRIQAHVRGH 900 QVRKKFKMFV WAVGFVDKVV LRWRRKGAGL HKPESESVDE TDDEDILKVF RKQKVDVAIE 960 EAVSQVMSMV ESSKARQQYR RMLEGYRQAK AEFDERASEM ASTSLGDDDM DKDMSDFYQF 1020 H

Sequence ? help Back to Top

Protein Sequence Length: 1021 aa Download sequence

MMQTPSLGFN INELVQEAKR RWLKPVEVLF ILQNHENRQL TESAPQKPPS GSLFLFNKRV  60
LRFFRRDGYG WRKKKDGRTV GEAHERLKVG NTEALNCYYA HGEQNPCFQR RSYWMLDPAY  120
EHIVLVHYRE VSEGRYSAAS SSHLSPGSST IIQEHTLYTS IPGSGSAVTE SHEPYQSSFS  180
PLSMEVSSVL AVQNNGVDHL DGDDEFTEVS RSSNAEVGQA LRRLEEQLSL NDNDIEEIPP  240
YHRQNGQSED LGGSYSETRP YHDNLEDSEI VNNHQYYGEG SGMLDDSEDS LFIQASDENG  300
KQLHKKNLPG NRIERKDSPF WKEMLELCSG SALIESRDRS LSSLDGSEKL VSTEMENISS  360
FPAPTSQWID LTGDDTENGI NCLPSSEDSI QISAARQFLL GSDDPVSPAS VSVAQEVENS  420
EVSTGLTGLN IYKPNPDSYN MWNDQGGQPR NIYSAESSCN TAQQKKFIIR EISPGWGYAT  480
EDTKVFIIGL FLSDPSESAW HCMFGDIETP ARIIQEGVLC CHAPPNISGK VPLYVTSGNR  540
ECCSEIREFE YIVRPRDSTR STEELLLLVR FAQMLLFDPV AVKEDTVAWG IDAAKKTKVD  600
EDHWEYMIEA LLLDSETSLG TIDWLLQKIL KDKLEKWLAS KHQEGDTPNC SLSKREQGVI  660
HMAGALGFEW ALSPILQSGI NINFRDVNGW TALHWAARFG REKMIAALIA AGASAEAVTD  720
PTSHDLVGKT AGSIAAASGH KGLAGYLSEV ALTSHLSSLT IEESELSKGS AVAEAERTVE  780
SISGGRLGET EDQVYLKDYL SAVRNAAQAA ARIQSAFRAH SFKRRQQKEV ASASDDEYGL  840
TPEYVAGLSA ASKIAFRGRD HNFDKAALSI QKKYRGWKGR KDFLALRQKV VRIQAHVRGH  900
QVRKKFKMFV WAVGFVDKVV LRWRRKGAGL HKPESESVDE TDDEDILKVF RKQKVDVAIE  960
EAVSQVMSMV ESSKARQQYR RMLEGYRQAK AEFDERASEM ASTSLGDDDM DKDMSDFYQF  1020
H

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G67310.1	1e-167	CAMTA family protein