PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026377519.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB_related

Protein Properties

Length: 511aa MW: 54777.9 Da PI: 6.5308

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026377519.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	33.1	1.3e-10	181	226	1	44
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT..TTS-HHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg..kgRtlkqcksrw 44 r++WTteEd l+ avk+lG ++W+ I + Rt+ q+ rw XP_026377519.1 181 RKPWTTEEDNELISAVKKLGERNWANILKADIfkGDRTASQLSQRW 226 789************************9854444577777777776 PP

Sequence ? help Back to Top
Protein Sequence Length: 511 aa Download sequence
MGRVCAPLLL TRYSATTILA LLKEVAQYPD LKIDWNALIK KTNTGITNAA EYQKLWRHLA 60 YCARLPETVE EKPEAPLQDD DSDLEYELEA FPPVNDEASL EAAACVKVLL ASGLSDYAGR 120 QEEKCSLKGM DITVPVSVQK QSPPGVTTTA KGLYGTVVTE AKELDGNAAN PVCSQPAKRK 180 RKPWTTEEDN ELISAVKKLG ERNWANILKA DIFKGDRTAS QLSQRWGIIR KRINVKSLPG 240 GGASGIQYEL TEQQLASNRA VSHALNMSVN NSLWEAYGID LTEGTTVSGQ QIRLQTPKGT 300 SSVTEKPLVI TKKADSIVPN SIIQAAAGAR IATPSTAKSL IKAAQSKTGV HISTIGESSM 360 PVPSVSPPPP AMERKISSVS SGTLSCASTS CGTIAAGKRT FGVRSVEVGN TLKEEKVQGS 420 PKEDEVKNSP RELVNIAEDG KQDHQTVLPD SVNVIEDQTT QNLSKLLNVE DAASDPMRLD 480 NHHMVNEKES AKNSPGTAIS VDAVSGPSSS Q

Sequence ? help Back to Top

Protein Sequence Length: 511 aa Download sequence

MGRVCAPLLL TRYSATTILA LLKEVAQYPD LKIDWNALIK KTNTGITNAA EYQKLWRHLA  60
YCARLPETVE EKPEAPLQDD DSDLEYELEA FPPVNDEASL EAAACVKVLL ASGLSDYAGR  120
QEEKCSLKGM DITVPVSVQK QSPPGVTTTA KGLYGTVVTE AKELDGNAAN PVCSQPAKRK  180
RKPWTTEEDN ELISAVKKLG ERNWANILKA DIFKGDRTAS QLSQRWGIIR KRINVKSLPG  240
GGASGIQYEL TEQQLASNRA VSHALNMSVN NSLWEAYGID LTEGTTVSGQ QIRLQTPKGT  300
SSVTEKPLVI TKKADSIVPN SIIQAAAGAR IATPSTAKSL IKAAQSKTGV HISTIGESSM  360
PVPSVSPPPP AMERKISSVS SGTLSCASTS CGTIAAGKRT FGVRSVEVGN TLKEEKVQGS  420
PKEDEVKNSP RELVNIAEDG KQDHQTVLPD SVNVIEDQTT QNLSKLLNVE DAASDPMRLD  480
NHHMVNEKES AKNSPGTAIS VDAVSGPSSS Q

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09710.1	2e-57	MYB_related family protein