PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026378192.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

HSF

Protein Properties

Length: 199aa MW: 23998.2 Da PI: 9.8012

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026378192.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	116.9	1.3e-36	6	99	1	102
HHHHHHHHHHCTGGGTTTSEES.SSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXX CS HSF_DNA-bind 1 aFlkklyeiledeelkelisws.engnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkell 94 +F++k+ye+++d+++++++sws + +nsfvv+++++++k+vLpkyF+h+nf+SF+RQLn+YgF+kv+ e+ weF+h+ F+kg+k+ll XP_026378192.1 6 QFIRKTYEMVDDPSTDSIVSWSqTFNNSFVVWNHRDLEKHVLPKYFRHNNFSSFIRQLNVYGFSKVDPER---------WEFAHEVFQKGQKHLL 91 6*******************7779*************************************999.........************ PP XXXXXXXX CS HSF_DNA-bind 95 ekikrkks 102 ++ikr++ XP_026378192.1 92 KNIKRRRP 99 ***986 PP

Sequence ? help Back to Top
Protein Sequence Length: 199 aa Download sequence
MGFPSQFIRK TYEMVDDPST DSIVSWSQTF NNSFVVWNHR DLEKHVLPKY FRHNNFSSFI 60 RQLNVYGFSK VDPERWEFAH EVFQKGQKHL LKNIKRRRPS SYTSAVIHQQ HSQGISSSNG 120 STETEEKESL KENKNKLIKE LVKLRQEQQN MRQCFQFIEQ RLDLMEQILQ QQLHSMDIRI 180 RYIEHKFSEI WNSREICKT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	91	97	LKNIKRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G17750.1	7e-43	HSF family protein