PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026378587.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family bHLH
Protein Properties Length: 202aa    MW: 22526 Da    PI: 7.1927
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026378587.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH34.53.7e-112972755
                    HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                     +ErrRRd++N ++ eLr+++P       + ++Ka+    A+ YIk Lq
  XP_026378587.1 29 DAERRRRDKLNARLMELRSIVPII-----TSMTKAAAIDDAITYIKGLQ 72
                    68*********************6.....58*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 202 aa     Download sequence    
MKYSGSGSGR GRGTLNEHGI LVFKSKNLDA ERRRRDKLNA RLMELRSIVP IITSMTKAAA  60
IDDAITYIKG LQKQVEGLGD CLNQMDVAVP QALEEESIAG KVELDQNIEK YTIEEQVKVT  120
SLEGDNLSIK ITCYSKRGIF TRLLELITTL GYEIMDNNFT SFKGVCLTTL SVKGNRVEIT  180
ELEKLEELLL KVVRGLNSNV QL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13136ERRRRD
23237RRRRDK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G21330.14e-36bHLH family protein