PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026378601.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family bHLH
Protein Properties Length: 170aa    MW: 19423.2 Da    PI: 9.7274
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026378601.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH24.54.9e-081972653
                    HHHHHHHHHHHHHHHHHHHCTSCC.C.......TTS-.STCHHHHHHHHHHHHH CS
             HLH  6 nerErrRRdriNsafeeLrellPk.as....kapskK.lsKaeiLekAveYIks 53
                    + +E++RR +++s  ++L +l+P+  s    + +skK     +   +A +YI++
  XP_026378601.1 19 KTIEKNRRIHMKSLCFKLVSLIPPtTStdhqNHSSKKdIPQTDLIDQAANYIQE 72
                    579*********************555***98899999**************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 170 aa     Download sequence    
MKSSSKGSSS ASAAAIDRKT IEKNRRIHMK SLCFKLVSLI PPTTSTDHQN HSSKKDIPQT  60
DLIDQAANYI QEQRKRIDKL KRKKDLLTTT WLPEYYKDFD SNTLEVVLIT GMNEHFMYYQ  120
LITVLEEEGA EVVNASFATV NDKIFYTVHS QVRAGVETPR ISDRLKKLVS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G20970.12e-19bHLH family protein