PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026378868.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

bHLH

Protein Properties

Length: 165aa MW: 18932.9 Da PI: 7.8304

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026378868.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	17	1.1e-05	1	40	16	55
HHHHHHHHHCTSCCC...TTS-.STCHHHHHHHHHHHHHHH CS HLH 16 iNsafeeLrellPkaskapskK.lsKaeiLekAveYIksLq 55 ++s +++L +ll ++ ++skK +s + L +A+eYI +Lq XP_026378868.1 1 MKSLYSQLNSLLIPP-ENSSKKlVSVPDQLHEATEYIENLQ 40 678999999998885.479999******************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 165 aa Download sequence
MKSLYSQLNS LLIPPENSSK KLVSVPDQLH EATEYIENLQ TIVERMKQKK QSLLVRPSTI 60 NINNNVKRPP EADLIPPIIE INIFGYALKV LVIASRIYNQ QSLFYEIIRV LQEEERAEIV 120 NANFSIIDNV GMHTIHSQVG DSELGFGVER VRRRLTKLVH EFVIV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G20970.1	4e-23	bHLH family protein