PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026378869.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family B3
Protein Properties Length: 327aa    MW: 37713.3 Da    PI: 5.5073
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026378869.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B340.45.1e-1325112997
                     HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS
              B3   9 dvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 
                     +  + g + lp kf++++  +++  ++   +l+ +sg +W+vk+  ++ s++ +++++G + Fv+   + +g f+ F++dg+s+f  +v +f
  XP_026378869.1  25 SIIQDGSFELPAKFVKKIekDLDDDGDGVAVLKVPSGVEWRVKM--TRESDAgVWFRNGIRTFVNCYSISAGHFLFFRYDGNSQF--HVVIF 112
                     556678899*********99556667778999************..6666666****************************9*99..88877 PP
2B330.66.2e-10228324198
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEE.TTS-EEEEEE..EEETTEEEE-TTHHHHHHHH...T--TT-EEEEEE-SSSEE. CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltled.esgrsWevkliyrkksgryvltkGWkeFvkan...gLkegDfvvFkldgrsefe 91 
                     ff + ++ ++ +++ + +p +f++ +  +    k++++   ++ r+W++++   +++    l+kG  +F + +   +Lk+gD++vF+ ++r+   
  XP_026378869.1 228 FFRIIVQTSYVEHKYMPIPWTFIRYFPDD---LKDVKVVAvSDRREWKIRI--LRSKTDLKLSKGVADFMNKKnglNLKVGDVLVFEIVKRRYLV 317
                     677778888888889********555333...345666664678*******..999999***********998444599********99988888 PP

                     .EEEEE- CS
              B3  92 lvvkvfr 98 
                     l+v+vf 
  XP_026378869.1 318 LKVHVFP 324
                     8998886 PP
Sequence ? help Back to Top
Protein Sequence    Length: 327 aa     Download sequence    
MGETQEWSSL GEEQRPKFYM IVHNSIIQDG SFELPAKFVK KIEKDLDDDG DGVAVLKVPS  60
GVEWRVKMTR ESDAGVWFRN GIRTFVNCYS ISAGHFLFFR YDGNSQFHVV IFNMKGSEIE  120
YHLFEDNNDS SSEDNHSNEA ENMECFEIQD SQEEDVDHME TLSGDSSSPD RDGSDEDNDE  180
DEVAKKKPLK LTGSKRKNRS LSSSNAKEYV VRANEIERSF ASTSTNPFFR IIVQTSYVEH  240
KYMPIPWTFI RYFPDDLKDV KVVAVSDRRE WKIRILRSKT DLKLSKGVAD FMNKKNGLNL  300
KVGDVLVFEI VKRRYLVLKV HVFPAKN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.17e-20B3 family protein