PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026378938.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family B3
Protein Properties Length: 474aa    MW: 54222.9 Da    PI: 7.0139
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026378938.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B338.52.1e-12391201297
                     HTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS
              B3  12 ksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 
                      ++r+++p   +++   ++++    ++e ++g s  v++  +k++++++l++GW+ Fv++ng k  Df+ F++dg ++f  +v v 
  XP_026378938.1  39 VENRVRIPEAICSRLPTDSPRCGLAVVEGPNGASSIVEV--NKTQDGTYLEEGWEIFVQENGFKKLDFLDFRHDGGMQF--HVEVS 120
                     35689*******999555555569999************..********************************999999..77765 PP
2B361.91e-192142991395
                     TT-EE--HHH.HTT.....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EEE CS
              B3  13 sgrlvlpkkfaeeh.....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvvk 95 
                      +r+++p +fa+eh     +   ee++++ l++e+g  We+ +  + +  + ++ kGWk F+ +n+Lk gDfv+F+l+++  +++lv++
  XP_026378938.1 214 VSRMTIPAQFAREHlqtnmK-GAEEKMDVLLQNEEGGIWELGV--CSCATQNYFIKGWKMFATDNKLKIGDFVIFELIDKhPGGKLVMS 299
                     3789*************953.456889****************..99999989999*********************988788877765 PP
3B351.12.4e-163774531593
                     -EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..E CS
              B3  15 rlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelv 93 
                      l++p  fa+eh  +++e++++ l++e+g  Wev ++   + ++  + kGWk F+ +n+Lk gD v+F+l+++  ++++v
  XP_026378938.1 377 YLIIPAMFAREHF-PTNEKMDVLLQNEEGCIWEVGFSS--CVSKSCFIKGWKMFATDNKLKIGDYVIFELIDKrPDAKFV 453
                     589*********5.445789****************54..444445667********************99654666554 PP
Sequence ? help Back to Top
Protein Sequence    Length: 474 aa     Download sequence    
MYQREKQKES KRSKMESSKL VEPVDDMKHH FFKILQGEVE NRVRIPEAIC SRLPTDSPRC  60
GLAVVEGPNG ASSIVEVNKT QDGTYLEEGW EIFVQENGFK KLDFLDFRHD GGMQFHVEVS  120
KGNGYPREER FVHVPSPVPS QESHGPREEC FTPVPSPLGR ERNQHGSPCE NSKLKKRDSF  180
NQEKFASAIE VESKVKSFSS PFPFFWTSVK LSNVSRMTIP AQFAREHLQT NMKGAEEKMD  240
VLLQNEEGGI WELGVCSCAT QNYFIKGWKM FATDNKLKIG DFVIFELIDK HPGGKLVMSF  300
HIYRVPVLEE CLTPVPSPLG RERKRHGSPS VNSTLKKRGS FNHEKFASAI EVETKVKSFS  360
SPFPFFWTSV KLSNVFYLII PAMFAREHFP TNEKMDVLLQ NEEGCIWEVG FSSCVSKSCF  420
IKGWKMFATD NKLKIGDYVI FELIDKRPDA KFVMNFHIYR VPVAVEDDPD DSEE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31690.17e-13B3 family protein