PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026378939.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family B3
Protein Properties Length: 304aa    MW: 35048 Da    PI: 6.5977
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026378939.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B344.42.9e-14241071198
                     HHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
              B3  11 lksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                       ++r+++p   +++   ++++    ++e ++g s  v++  +k++++++l++GW+ Fv++ngLk  D++ F++dg ++f  +vkvf+
  XP_026378939.1  24 EVQNRMRIPEAICSRLPTDSPRCGLAVVEGPNGASLIVEV--SKTQDGTYLEEGWEIFVQENGLKKLDILDFRHDGGMQF--HVKVFE 107
                     44678********999555555569999************..********************************999999..**9997 PP
2B365.29.6e-212002831393
                     TT-EE--HHH.HTT.....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..E CS
              B3  13 sgrlvlpkkfaeeh.....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelv 93 
                      +r+++p kfa+eh     +   ee++++ l++e+g +We+++  + +  + ++ kGWk F+ +n+Lk gDfv+F+l+++  ++++v
  XP_026378939.1 200 VCRMSIPAKFAREHlqtnmK-GREEKMDVLLQNEEGGTWELRV--CSYVTQNYFIKGWKMFATDNKLKIGDFVIFELIDKrPDAKFV 283
                     399**************964.446789****************..88888888889********************99654666554 PP
Sequence ? help Back to Top
Protein Sequence    Length: 304 aa     Download sequence    
MESSKLVEPV DDRKHHFFKI LQGEVQNRMR IPEAICSRLP TDSPRCGLAV VEGPNGASLI  60
VEVSKTQDGT YLEEGWEIFV QENGLKKLDI LDFRHDGGMQ FHVKVFEGNE CPREECFAPV  120
PSPVPAQESH GLREECFTPV PSPLERERKR QGSPCESSNL KKRDSFNHEK FASAIEVESK  180
VKSFSSPFPF FWTSVKLSDV CRMSIPAKFA REHLQTNMKG REEKMDVLLQ NEEGGTWELR  240
VCSYVTQNYF IKGWKMFATD NKLKIGDFVI FELIDKRPDA KFVMNFHIYR NYDGHPLLCT  300
YRVE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31690.12e-15B3 family protein