PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026379112.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

GRF

Protein Properties

Length: 247aa MW: 26929.4 Da PI: 9.0183

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026379112.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	79.3	3.6e-25	129	172	1	44
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 ++epgrCrRtDGKkWRC ++v++ +k+CErH+hrgr+rsrk++e XP_026379112.1 129 EPEPGRCRRTDGKKWRCAKDVVPEQKYCERHMHRGRNRSRKPVE 172 69***************************************987 PP
2	QLQ	55.8	1.4e-19	61	97	1	37
QLQ 1 saFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 s FT Qlq++++Q+l+yK++aa++PvP +L+++i+k XP_026379112.1 61 SVFTFLQLQEFEHQALIYKHMAAGVPVPFHLVVPIWK 97 67*********************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 247 aa Download sequence
MEEVAQAPPS MTARFTDSGS IEGEKSNLTS PPPLPPAATN TKGLLQLDLE LGPRLMTNGK 60 SVFTFLQLQE FEHQALIYKH MAAGVPVPFH LVVPIWKSLA SSFGSLHSGL YPSFMGCKGI 120 YFDYKNSMEP EPGRCRRTDG KKWRCAKDVV PEQKYCERHM HRGRNRSRKP VEIPYQNASS 180 STANAANGNT GLSISIPLQL MANNNSNCTT TSMSNNNTTT TAATATGLDF SPKSVLQNGG 240 NNCKNES

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37740.1	3e-36	GRF family protein