PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026379209.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family M-type_MADS
Protein Properties Length: 358aa    MW: 39727.5 Da    PI: 5.74
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026379209.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF25.22.1e-087361241
                    HHHHHHHHHHHHHHHHHHHHT-EEEEEEE- CS
          SRF-TF 12 tfskRrngilKKAeELSvLCdaevaviifs 41
                    +++ R++g+ KK +E S+L d+++++++++
  XP_026379209.1  7 SYATRLTGLKKKVHEFSTLVDVDACMLVYG 36
                    899*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 358 aa     Download sequence    
MLDKKKSYAT RLTGLKKKVH EFSTLVDVDA CMLVYGGPKQ RGSHHRRRDD QPETFPENRR  60
DVIRIVNRYL GIPKEERVKR HEKLSDDNGK NKIEEEDDDN KDELVNNQKR GNGSNSDGLE  120
WDDQYDKLSA DELQRLIDSV ESKIGIIDEK IQVMENPRSG GVSDPRVVAN DTTQGISNNN  180
NNNSMLMQMQ MQPIYVLQPA FNQNLAAANN GSTGMVPMGV PMGMINPMST ANGENVPYPI  240
IPMVPMMAAR PTGRDNMVPM MAVRPSGRDN NNQEVYGNHQ GQQVAYFVPQ AGNNQGQQVA  300
YIVPQAGNNQ GQQVGYFVPQ AGNNQGQQVA YIVPQAFVQP TPSTRSFIPD LMPGASDA