PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026379213.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family B3
Protein Properties Length: 238aa    MW: 27085.3 Da    PI: 4.5482
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026379213.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B336.96.6e-121352141497
                     T-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-.SS.SEE..EEEEE CS
              B3  14 grlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld.gr.sefelvvkvf 97 
                     +++ +pk+     ++ +e+++ + l + ++++W+vk+  ++++ +  + + Wk+Fv++n+L+  D +vF+l+ +r ++ +++++++
  XP_026379213.1 135 HNMGIPKSVN---QLLPEKEVPVNL-SYRNKTWKVKY--QGNRVTKKFDSSWKHFVHDNNLRFEDGCVFELTeHRdNCINFRIQIL 214
                     5567777654...333445444553.4578*******..99998899***********************9855556666666665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 238 aa     Download sequence    
MGKPRANVAR TIQLDTQMEL EQAGSSQSQI VLGLPSLQET GDTQVEFEHS SSSPIILGLP  60
SVQKIGETIK VSDINDSKSP CNPIQQEAEN EIDSTEEEQD QMKLNDTTTM EEQDEPYFLT  120
DKPYFHCILG KTQLHNMGIP KSVNQLLPEK EVPVNLSYRN KTWKVKYQGN RVTKKFDSSW  180
KHFVHDNNLR FEDGCVFELT EHRDNCINFR IQILDGDIPS ELLDRVEGQT IEHPITIG