PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026379248.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family HD-ZIP
Protein Properties Length: 256aa    MW: 28534.2 Da    PI: 7.997
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026379248.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox58.61.1e-18100154256
                     T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     rk+ +++keq + Lee F++n++++ +++e LA +l+L+ rqV vWFqNrRa+ k
  XP_026379248.1 100 RKKLRLSKEQSRLLEESFRENHTLNPKQKEALAFQLKLKPRQVEVWFQNRRARTK 154
                     788899***********************************************98 PP
2HD-ZIP_I/II120.49.2e-39100188189
     HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLre 89 
                     +kk+rlskeq++lLEesF+e+++L+p++K++la +L+l+prqv+vWFqnrRARtk+kq+E+++e+Lkr++ +l+een+rL++eve+Lr+
  XP_026379248.1 100 RKKLRLSKEQSRLLEESFRENHTLNPKQKEALAFQLKLKPRQVEVWFQNRRARTKLKQTEMECEYLKRCFGSLTEENRRLQREVEQLRA 188
                     69*************************************************************************************93 PP
Sequence ? help Back to Top
Protein Sequence    Length: 256 aa     Download sequence    
MAISPSSNSP SCLDLTISVP GFASSSASSS SPLSLIPSSE GGGSCSMKNL DMNQVPAFTY  60
SLMEEEEEID HEYLTIGTRS SPLLDDHDQE SGGDGNAPPR KKLRLSKEQS RLLEESFREN  120
HTLNPKQKEA LAFQLKLKPR QVEVWFQNRR ARTKLKQTEM ECEYLKRCFG SLTEENRRLQ  180
REVEQLRALR VGPPTILSPN SFEPLQASNL TMCPRCERVA TNSGNASDKC PSAGKTANKQ  240
VHQRVLLHSR QPWAAC
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1149157RRARTKLKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01430.13e-70HD-ZIP family protein