PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026379297.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

YABBY

Protein Properties

Length: 196aa MW: 21623.1 Da PI: 8.8822

Description

YABBY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026379297.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	YABBY	167.8	7.7e-52	1	163	1	163
YABBY 1 advfssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvn...lakasqllaaeshldeslkeelleelkveeenlksnvekeesa 92 +d++s se++Cyv+CnfCnt+lav vP + ++ +vtv+CG+C l ++ + + +++ +a ++ +s+ ++ + ++ ++++ + XP_026379297.1 1 MDIHSHSEHLCYVRCNFCNTVLAVGVPCKRSVDTVTVKCGYCNCLSFLStrpVGQVHHQSTALEQ--QSMSPNTSGTFQHPPPPQGYFEHRKGGQ 93 578999*********************************987655540124444555555554..6778888888888888888999999999 PP YABBY 93 stsvsseklsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahf 163 ++s+ss++l+ +++ ++ ++p v++PPe++ r Psaynrf+keeiqrik++nP+i hreafs aaknWa + XP_026379297.1 94 TSSMSSSSLTFDQQPSS-NAPYVVKPPERKHRLPSAYNRFMKEEIQRIKTANPEIPHREAFSSAAKNWARY 163 99999999887776655.57889********************************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 196 aa Download sequence
MDIHSHSEHL CYVRCNFCNT VLAVGVPCKR SVDTVTVKCG YCNCLSFLST RPVGQVHHQS 60 TALEQQSMSP NTSGTFQHPP PPQGYFEHRK GGQTSSMSSS SLTFDQQPSS NAPYVVKPPE 120 RKHRLPSAYN RFMKEEIQRI KTANPEIPHR EAFSSAAKNW ARYVPHSSGS SAASSSNTNE 180 RINAFGMGSL GDNNHP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69180.1	8e-52	YABBY family protein