PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026379340.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family B3
Protein Properties Length: 255aa    MW: 29197.1 Da    PI: 9.8903
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026379340.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B335.61.7e-111241991698
                     EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
              B3  16 lvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                     l +p +  +++ ++ e ++ +++ede+g ++e k+  ++     +lt+GWk F  +++L+ gD +v++ ++   ++ +v++f+
  XP_026379340.1 124 LFVPVEI-RNNHLPREAEVRIVFEDEDGSVYEAKY--NGVY--GLLTTGWKTFFMDHKLDNGDALVIEIIE--PTRVKVHIFK 199
                     4566665.466677888999***************..5444..47***********************775..5666898886 PP
Sequence ? help Back to Top
Protein Sequence    Length: 255 aa     Download sequence    
MAQSNSYEEA RKLRLEDNKR KFQMANSLSN VIRKKNNTAK NQVKSKRTPV NPDFVRRSSR  60
PREQVTYTEN LGLKNCKTSY IATRVVTYAE RSDALNRAMS FQSGLLSGNP SFVKSVLHSH  120
VSVLFVPVEI RNNHLPREAE VRIVFEDEDG SVYEAKYNGV YGLLTTGWKT FFMDHKLDNG  180
DALVIEIIEP TRVKVHIFKV PNDVSEVKVD ELKNTEESNS IKTVDVNKLP RLQGDEVRNP  240
NKVEHCDTRI TMLKN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G58280.11e-18B3 family protein