PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026379341.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family B3
Protein Properties Length: 233aa    MW: 26472.1 Da    PI: 9.7101
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026379341.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B335.81.4e-111021771698
                     EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
              B3  16 lvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                     l +p +  +++ ++ e ++ +++ede+g ++e k+  ++     +lt+GWk F  +++L+ gD +v++ ++   ++ +v++f+
  XP_026379341.1 102 LFVPVEI-RNNHLPREAEVRIVFEDEDGSVYEAKY--NGVY--GLLTTGWKTFFMDHKLDNGDALVIEIIE--PTRVKVHIFK 177
                     4566665.466677888999***************..5444..47***********************775..5666898886 PP
Sequence ? help Back to Top
Protein Sequence    Length: 233 aa     Download sequence    
MANSLSNVIR KKNNTAVKNQ VKSKRTPVNP DFVRRSSRPR EQVTYTENLG LKNCKTSYIA  60
TRVVTYAERS DALNRAMSFQ SGLLSGNPSF VKSVLHSHVS VLFVPVEIRN NHLPREAEVR  120
IVFEDEDGSV YEAKYNGVYG LLTTGWKTFF MDHKLDNGDA LVIEIIEPTR VKVHIFKVPN  180
DVSEVKVDEL KNTEESNSIK TVDVNKLPRL QGDEVRNPNK VEHCDTRITM LKN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G58280.16e-14B3 family protein