PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026379342.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family B3
Protein Properties Length: 232aa    MW: 26373 Da    PI: 9.7101
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026379342.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B335.91.4e-111011761698
                     EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
              B3  16 lvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                     l +p +  +++ ++ e ++ +++ede+g ++e k+  ++     +lt+GWk F  +++L+ gD +v++ ++   ++ +v++f+
  XP_026379342.1 101 LFVPVEI-RNNHLPREAEVRIVFEDEDGSVYEAKY--NGVY--GLLTTGWKTFFMDHKLDNGDALVIEIIE--PTRVKVHIFK 176
                     4566665.466677888999***************..5444..47***********************775..5666898886 PP
Sequence ? help Back to Top
Protein Sequence    Length: 232 aa     Download sequence    
MANSLSNVIR KKNNTAKNQV KSKRTPVNPD FVRRSSRPRE QVTYTENLGL KNCKTSYIAT  60
RVVTYAERSD ALNRAMSFQS GLLSGNPSFV KSVLHSHVSV LFVPVEIRNN HLPREAEVRI  120
VFEDEDGSVY EAKYNGVYGL LTTGWKTFFM DHKLDNGDAL VIEIIEPTRV KVHIFKVPND  180
VSEVKVDELK NTEESNSIKT VDVNKLPRLQ GDEVRNPNKV EHCDTRITML KN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G58280.15e-14B3 family protein